Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCACCCTCATTGCTGTT
..(((((((.((.(((((((.&))))))).)).))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178000
GeneSymbolPTPA
Binding site2589,2610
Score0.923
Seed1
Au0.456
Energy-19.4
Binding len21
Me-7.489
Phylopstem-0.6323803285714285
Phylopflank-0.11628240249999991
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure