Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCATCTGGCAGCTGCTGTGCCTGAGGTGGCTGTTTACCTAAAGGAGTCAGTGG
((((((((((((..((((((((&.)))))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178001
GeneSymbolPTPA
Binding site664,721
Score0.962
Seed1
Au0.441
Energy-28.2
Binding len22
Me-6.084
Phylopstem5.2387932500000005
Phylopflank5.265708335000001
Longest consecutive pairings20
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure