Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCCAC
...((((((((((((((((((.&.)))))))))....................))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178010
GeneSymbolSOX5
Binding site992,1037
Score1.0
Seed0
Au0.515
Energy-24.4
Binding len40
Me-6.515
Phylopstem3.2962610605263154
Phylopflank5.07739722625
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end7
PositionCDS
2D Structure