Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTGGATGGCAAAAAGCTGCGC
.(((((((((.(((...((((&))))....))).)))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178010
GeneSymbolSOX5
Binding site773,799
Score0.846
Seed1
Au0.471
Energy-19.3
Binding len26
Me-7.587
Phylopstem5.356412753846154
Phylopflank5.21272089
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure