Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTGCAGAAGTGAGCTGAGCGTGTGCGCGGTA
(((..((((((..((((((((.&))))))))..............))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178011
GeneSymbolLRRTM3
Binding site27,61
Score0.846
Seed0
Au0.382
Energy-17.9
Binding len34
Me-15.725
Phylopstem6.12245
Phylopflank4.4555453758823536
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end7
Position5UTR
2D Structure