Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CATTGGTAGCCAGGG
.((((((...(((((.......&)))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178011
GeneSymbolLRRTM3
Binding site2301,2316
Score0.846
Seed1
Au0.544
Energy-17.5
Binding len15
Me-8.639
Phylopstem2.111772833333333
Phylopflank2.034121375
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure