Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGCATGGTTACAATAACAGCCAGCAGCTGCAGC
((((((((((((((((.....&.)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178011
GeneSymbolLRRTM3
Binding site5160,5197
Score0.974
Seed1
Au0.559
Energy-27.0
Binding len19
Me-3.938
Phylopstem5.8214993470588245
Phylopflank6.029056110000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure