Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGCGAGCATGAAGCAGCTGCAGC
(((((((((((.(((((.(((&))).))))).).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178011
GeneSymbolLRRTM3
Binding site1881,1908
Score1.0
Seed1
Au0.397
Energy-24.6
Binding len27
Me-7.284
Phylopstem0.54195634375
Phylopflank1.3664538149999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure