Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACTGATGCATCTGTGTGAGCCAGGC
.((((((((((((((((.....&.))))).)))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178013
GeneSymbolPRIMA1
Binding site1379,1406
Score0.846
Seed1
Au0.456
Energy-18.7
Binding len21
Me-3.793
Phylopstem5.394113999999999
Phylopflank4.57313806
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure