Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCTCAGAAGGAGCCC
....((((((.(((((((((.(&).))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178013
GeneSymbolPRIMA1
Binding site1880,1898
Score0.885
Seed0
Au0.456
Energy-24.3
Binding len18
Me-12.371
Phylopstem4.532194555555555
Phylopflank4.866024124999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure