Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCGGGACTTGGTGCTGCGCCGTGGCTGCT
..((((((((((.((((....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178013
GeneSymbolPRIMA1
Binding site112,144
Score1.0
Seed1
Au0.309
Energy-22.2
Binding len16
Me-6.246
Phylopstem0.98099082
Phylopflank1.9459806174999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure