Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCTGCAGCTT
....((((((((((...((((&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178019
GeneSymbolCATSPER3
Binding site719,734
Score1.0
Seed0
Au0.471
Energy-18.5
Binding len15
Me-10.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure