Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGAGGCTGCAGCAATCTGTGAGGCAGCCGCAATCTGCGAG
((((((.(((((((((.....&.)))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330515
GeneSymbolLETM2
Binding site2049,2095
Score0.808
Seed0
Au0.441
Energy-23.0
Binding len19
Me-5.481
Phylopstem-0.06065656666666662
Phylopflank0.3081138175
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure