Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGGCTGCT
..((((((((((((((.(((.&.)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178039
GeneSymbolERC1
Binding site4502,4549
Score0.885
Seed1
Au0.397
Energy-23.9
Binding len21
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure