Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAAAACTGCAGTTTTGACAGCAT
.(((((((((((((((((((.&)))))))..)))))))))......))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178042
GeneSymbolACTL6A
Binding site665,693
Score0.885
Seed1
Au0.559
Energy-19.2
Binding len28
Me-3.793
Phylopstem4.864630148148149
Phylopflank4.36165319375
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure