Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGGACGATTTATTCCAGTTTGCAGTTGCAGG
((((((((((((((((..(((&)))....)))))...........))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178120
GeneSymbolDLX1
Binding site560,595
Score0.846
Seed1
Au0.515
Energy-18.7
Binding len35
Me-3.938
Phylopstem2.8687571444444444
Phylopflank2.3330388199999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure