Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCCCCTGAATTATATTTGTATGCTGGGTG
((((((((((((((((((....&.))))))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178126
GeneSymbolRETREG3
Binding site1543,1572
Score0.846
Seed1
Au0.456
Energy-20.0
Binding len21
Me-3.938
Phylopstem-0.03619147368421053
Phylopflank-0.5264911012500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure