Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178126
GeneSymbolRETREG3
Binding site2244,2267
Score0.846
Seed1
Au0.382
Energy-28.9
Binding len23
Me-10.109
Phylopstem-0.5803657272727272
Phylopflank-0.55810984375
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure