Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCCGTGACCCCAATGTGGCCAGGAGGGAGCAGCCAGA
..(((((((((((((((.((.(&.).)).))))))))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178130
GeneSymbolNME9
Binding site768,808
Score0.923
Seed1
Au0.382
Energy-25.8
Binding len25
Me-4.957
Phylopstem-0.6000366055555555
Phylopflank-0.5032841425
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure