Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGTGTGGAGGAAACTGCAGCTGA
...(((((((((((.......&.))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178135
GeneSymbolHSD17B13
Binding site252,277
Score0.923
Seed0
Au0.471
Energy-19.6
Binding len13
Me-7.483
Phylopstem0.2567850909090908
Phylopflank-0.0651719975
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure