Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACTTGGAAAGGCATCAGTTG&CGGGTGATCAGCTCTTTCCAAGA
..(((((((((((((((.(((&))).))))..)).))))))))).
Details
MiRNAhsa-miR-890
RefseqIDNM_178138
GeneSymbolLHX3
Binding site2334,2357
Score0.808
Seed1
Au0.657
Energy-19.5
Binding len23
Me-4.957
Phylopstem4.677883111111112
Phylopflank5.1766404349999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure