Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTCCCTCCCGCAGCTGCT
..((((((((((..(..((((&)).))..)..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178140
GeneSymbolPDZD2
Binding site2289,2310
Score0.923
Seed1
Au0.382
Energy-23.0
Binding len21
Me-7.336
Phylopstem-0.26537505
Phylopflank-0.5465477650000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure