Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCATCTGCAGCTGCT
..((((((((((.((((....&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178152
GeneSymbolDCX
Binding site2870,2886
Score0.846
Seed1
Au0.529
Energy-24.3
Binding len16
Me-6.246
Phylopstem3.9448756300000007
Phylopflank3.622009137499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure