Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGGATGAGGCAGC
..(((.(((.(((((((((((.&))))))))))).))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349896
GeneSymbolHPS4
Binding site2344,2364
Score1.0
Seed0
Au0.412
Energy-27.6
Binding len20
Me-8.1
Phylopstem0.8327019636363636
Phylopflank1.4362240850000005
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure