Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCCATCGTGAGGAGCCC
....((((((((.((((((((.&)))).)))..).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178153
GeneSymbolDCX
Binding site4570,4591
Score0.846
Seed0
Au0.456
Energy-22.2
Binding len21
Me-10.836
Phylopstem0.41816087272727265
Phylopflank0.40438572874999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure