Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATCCCTGCAGCTGTT
..((((((((((..((((((.&))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178153
GeneSymbolDCX
Binding site8447,8466
Score1.0
Seed1
Au0.544
Energy-24.8
Binding len19
Me-7.103
Phylopstem5.4052199000000005
Phylopflank4.5681044462500004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure