Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCATCTGCAGCTGCT
..((((((((((.((((....&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178153
GeneSymbolDCX
Binding site2855,2871
Score1.0
Seed1
Au0.529
Energy-24.3
Binding len16
Me-6.246
Phylopstem-0.34618359400000004
Phylopflank-0.16343708750000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure