Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGGAGCCACATGCTGCT
..(((((((.((((.((((((&)))))).)))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178153
GeneSymbolDCX
Binding site4380,4401
Score0.846
Seed1
Au0.456
Energy-22.4
Binding len21
Me-6.935
Phylopstem0.36719375
Phylopflank0.20895264
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure