Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAGGCAGTGTGCAGGA
....((((((((((((((...&))))))))....)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001349896
GeneSymbolHPS4
Binding site4797,4816
Score0.846
Seed0
Au0.426
Energy-26.7
Binding len19
Me-9.547
Phylopstem-0.5959978333333333
Phylopflank-0.29710892499999997
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure