Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGATGGAAAGGTGTACGCATTGTACAGGCAGCTGCT
..((((((((..(((((((((&))))))))).........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178167
GeneSymbolZNF598
Binding site375,418
Score0.923
Seed1
Au0.368
Energy-21.7
Binding len43
Me-11.129
Phylopstem2.7406591700000003
Phylopflank2.538735826500001
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end8
PositionCDS
2D Structure