Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGTGCCGCGAGGAGCTGCGC
.((((((((((((.....(((&)))....)))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178167
GeneSymbolZNF598
Binding site269,293
Score0.846
Seed1
Au0.338
Energy-21.3
Binding len24
Me-5.619
Phylopstem2.8219848749999996
Phylopflank2.1875943162500002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure