Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178171
GeneSymbolGSDMA
Binding site1695,1718
Score0.846
Seed1
Au0.397
Energy-26.9
Binding len23
Me-10.109
Phylopstem-1.021632818181818
Phylopflank-0.991103909125
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure