Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCAGACCCAGCTGCT
..(((((((.((((....(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178171
GeneSymbolGSDMA
Binding site39,57
Score0.923
Seed1
Au0.309
Energy-21.2
Binding len18
Me-7.168
Phylopstem-0.006272600000000009
Phylopflank0.18133950865384613
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure