Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTTGCAGCTCAGCAGGTGCT
..(((.(((((((((((((((&)).)))))))))..)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178173
GeneSymbolIHO1
Binding site1982,2005
Score0.923
Seed0
Au0.426
Energy-23.3
Binding len23
Me-6.858
Phylopstem0.21450654999999996
Phylopflank-0.31647342500000003
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure