Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGACAAAGCCCCAGCTGTT
..(((((((.((((((..(((&)))..)))..))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178173
GeneSymbolIHO1
Binding site643,665
Score0.846
Seed1
Au0.588
Energy-20.0
Binding len22
Me-6.2
Phylopstem-1.535849
Phylopflank-0.4541936725000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure