Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGCAGCCCCCAACCACTTCCAAAACCTTGCAGAAGCAGC
.....(((((..(((((((((&.)))))))))..)))))
Details
MiRNAhsa-miR-5047
RefseqIDNM_178176
GeneSymbolMOGAT3
Binding site197,240
Score1.0
Seed0
Au0.471
Energy-20.7
Binding len17
Me-19.837
Phylopstem-0.15436177777777782
Phylopflank0.47239861749999995
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure