Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGTCCGAGAATGTCGACCGGGGCGCGGGCTCCATCCGGGAAGCCGGTGG
((((((((...((((((((.((&.)).)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178190
GeneSymbolATP5IF1
Binding site143,194
Score1.0
Seed1
Au0.309
Energy-22.9
Binding len21
Me-9.061
Phylopstem0.09858442499999995
Phylopflank0.6150325837500001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure