Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
.((((((((((((((((((((&))))..)))))))......................))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349898
GeneSymbolHPS4
Binding site2693,2739
Score0.846
Seed1
Au0.397
Energy-22.8
Binding len46
Me-3.793
Phylopstem3.3102356666666664
Phylopflank5.121993624999999
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure