Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGGGCACTGGCAGCTGCAGC
((((((((((.(.(((..(((&))).....))).).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349898
GeneSymbolHPS4
Binding site4666,4691
Score0.846
Seed1
Au0.412
Energy-22.8
Binding len25
Me-8.051
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure