Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTATAAGGTGGTCGGGA
.((((((.(((..(((((((((&)))))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178229
GeneSymbolIQGAP3
Binding site3532,3553
Score0.815
Seed1
Au0.426
Energy-18.5
Binding len21
Me-10.743
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure