Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGACCGGGACAGCTCGCGGC
((((((((((((((.((((((&)))))))))))...))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178232
GeneSymbolHAPLN3
Binding site22,47
Score0.846
Seed1
Au0.338
Energy-21.2
Binding len25
Me-4.673
Phylopstem0.42801533888888876
Phylopflank0.37590781444444454
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure