Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGGATGAGGCAGC
..(((.(((.(((((((((((.&))))))))))).))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349901
GeneSymbolHPS4
Binding site2398,2418
Score1.0
Seed0
Au0.412
Energy-27.6
Binding len20
Me-8.1
Phylopstem1.7351648181818182
Phylopflank2.8716247000000004
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure