Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCTGGCCAGGCACCGGCAGCTGCAC
.(((((((((((.(((..(((&.)))..)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178310
GeneSymbolSNAI3
Binding site593,623
Score0.846
Seed1
Au0.279
Energy-25.1
Binding len22
Me-5.082
Phylopstem0.08013802500000002
Phylopflank-0.19949418250000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure