Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGCCGGGC
.(((((((......(((((...&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178311
GeneSymbolGGTLC1
Binding site67,80
Score0.846
Seed1
Au0.397
Energy-15.8
Binding len13
Me-14.41
Phylopstem-0.589201142857143
Phylopflank-0.6246186724999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure