Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCTGTTGTGGTGCCAGA
..((((((((((((((((....&)))).)))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178313
GeneSymbolSPTBN1
Binding site891,910
Score0.923
Seed1
Au0.5
Energy-17.6
Binding len19
Me-4.957
Phylopstem-0.08843708333333335
Phylopflank0.70702921525
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure