Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAACTACAACCAGCTGGAAGGCAGATTCAAGCAGCTGCAAG
(((((((((((((((((((((&))))))))))).........................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178313
GeneSymbolSPTBN1
Binding site458,505
Score0.923
Seed1
Au0.471
Energy-30.5
Binding len47
Me-3.938
Phylopstem2.0668567695652182
Phylopflank2.875383985
Longest consecutive pairings11
Position of longest consecutive pairings36
Pairings in 3prime end8
PositionCDS
2D Structure