Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAGGCAGTGTGCAGGA
....((((((((((((((...&))))))))....)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001349901
GeneSymbolHPS4
Binding site4851,4870
Score0.846
Seed0
Au0.426
Energy-26.7
Binding len19
Me-9.547
Phylopstem-0.5604001000000001
Phylopflank-0.08200044000000006
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure