Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGAGCCCGGACTGTC
..(((((((.((((..((((.&))))..))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178328
GeneSymbolCCR3
Binding site660,679
Score0.846
Seed1
Au0.471
Energy-17.6
Binding len19
Me-7.168
Phylopstem2.326886
Phylopflank2.1322016275000006
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure