Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGGAGGCTGCACTGCAGCGTAGCCGCTTGGGCGGGCGGCCAGTGG
(((((((((((.(((((((...&.))))))).))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178336
GeneSymbolMRPL52
Binding site60,107
Score0.846
Seed1
Au0.294
Energy-24.4
Binding len22
Me-7.284
Phylopstem0.399
Phylopflank0.4341
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure