Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGCATGCATCTCCCACTTTTGGCTTTCCTGGAGAGGAGCTTGAAGAGGTGG
((((((((((((((((((.(((&.)))))))))))))))))......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349902
GeneSymbolHPS4
Binding site202,256
Score1.0
Seed1
Au0.485
Energy-25.2
Binding len29
Me-3.938
Phylopstem0.07523595833333335
Phylopflank-0.25650732125000003
Longest consecutive pairings17
Position of longest consecutive pairings11
Pairings in 3prime end7
Position5UTR
2D Structure